Computational Biology Overview: Lecture notes from 2007 Workshop
Robert Hochberg, East Carolina University

• Introduction to BLAST
• Dynamic Programming
• Phylogenetic Footprinting
• Semi-Global Alignment
• Parsimony
• Reconstructing Phylogenies
• Genome Rearrangements
• Suffix Tree
• T-Shirt design 1
• T-Shirt design 2

Solutions
• Computational Biology

Epidemiology Overview: Lecture notes from from 2008 Workshop
Tasha Fingerlin, University of Colorado at Denver and Health Sciences Center

• Introduction to Epidemiology and the Modules
• Infectious Disease 1st Session
• Infectious Disease 2nd Session
• Imperfect testing review
• Homework - Mixed Groups
• Homework
• games_n_info

Pre-Program Materials

Math Pre-Program for Biology Teachers: http://www.cs.ecu.edu/%7Ehochberg/DCI/BioMAP2007.html

Biology Pre-Program for Math Teachers: http://www.hinsdale86.org/staff/kgabric/DIMACS/DimacsIntro.htm

Misc. Resources

Related Math and Bio Links: http://dimacs.rutgers.edu/BMC/links.html

Presentation on Surveillance, Dona Schneider, Rutgers University: http://dimacs.rutgers.edu/BMC/FieldTesters/2008/Presentations/schneider.ppt